Information for motif25


Reverse Opposite:

p-value:1e-14
log p-value:-3.268e+01
Information Content per bp:1.769
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif7.94%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets150.5 +/- 79.6bp
Average Position of motif in Background159.6 +/- 81.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGTGGGAGGTTA
NGCGTGGGCGGR--

MA0471.1_E2F6/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGTGGGAGGTTA
GGGCGGGAAGG--

MA0472.1_EGR2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGGAGGTTA
GTGCGTGGGCGGGNG

MA0469.1_E2F3/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GGTGGGAGGTTA
NNGTGNGGGCGGGAG----

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTGGGAGGTTA
GGCGGGAARN--

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTGGGAGGTTA---
GTATTGGGTGGGTAATT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTGGGAGGTTA
TGCGTGGGYG----

MA0470.1_E2F4/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTGGGAGGTTA
GGGCGGGAAGG--

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTGGGAGGTTA
CGGGCGGGAGG---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTGGGAGGTTA
CSTGGGAAAD--