Information for motif28


Reverse Opposite:

p-value:1e-13
log p-value:-3.037e+01
Information Content per bp:1.947
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets143.2 +/- 78.4bp
Average Position of motif in Background103.6 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGATACTG-----
TNNTGCTACTGTNNNN

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACTG--
NNATNTGATANNNNN

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGATACTG-----
CNNNGCTACTGTANNN

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACTG----
ANNNATGATACCCCATC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGATACTG
ACTGAAACCA

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACTG----
ANANNTGATACCCNATN

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACTG----
AATNTTGATACCCTATN

POL002.1_INR/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGATACTG-
-NNNANTGA

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACTG----
ANANGTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACTG----
ANANNTGATACCCTATN