| p-value: | 1e-13 |
| log p-value: | -3.033e+01 |
| Information Content per bp: | 1.572 |
| Number of Target Sequences with motif | 18.0 |
| Percentage of Target Sequences with motif | 6.50% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 0.82% |
| Average Position of motif in Targets | 127.5 +/- 93.6bp |
| Average Position of motif in Background | 56.5 +/- 11.8bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 1 |
| Score: | 0.69
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGSCAAATT
CTTGGCAA--- |
|
|
|
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer
| Match Rank: | 2 |
| Score: | 0.66
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TTGSCAAATT------
NTAATTDGCYAATTANNWWD |
|
|
|
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGSCAAATT
GTTGCGCAAT- |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TTGSCAAATT
TTGGCA---- |
|
|
|
PH0036.1_Gsx2/Jaspar
| Match Rank: | 5 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGSCAAATT-----
NTNNGCTAATTANCNT |
|
|
|
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGSCAAATT
ATTTGCATAT- |
|
|
|
MA0102.3_CEBPA/Jaspar
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TTGSCAAATT
ATTGCACAATA |
|
|
|
PH0049.1_Hoxa2/Jaspar
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGSCAAATT-----
NTGAGCTAATTACCNT |
|
|
|
PB0145.1_Mafb_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---TTGSCAAATT--
CAATTGCAAAAATAT |
|
|
|
PH0060.1_Hoxb5/Jaspar
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTGSCAAATT-----
ATGNGCTAATTANCNT |
|
|
|
