Information for motif33


Reverse Opposite:

p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.935
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets161.4 +/- 86.1bp
Average Position of motif in Background164.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AATAGTAGACTT-----
-NNATTGGACTTTNGNN

MA0153.1_HNF1B/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATAGTAGACTT
TTAATATTTAAC--

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATAGTAGACTT
AATAATT-----

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AATAGTAGACTT
TAGTGAACAATAGATTT

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AATAGTAGACTT
--TAATTGATTA

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATAGTAGACTT
NNTNNCAATATTAG----

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AATAGTAGACTT
AATGAACAATGGAATT

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AATAGTAGACTT---
AATAAAGAACAATAGAATTTCA

PH0018.1_Dbx1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AATAGTAGACTT
TNATTATTAATTAATTA

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AATAGTAGACTT
CCAAAAATAG-------