Information for motif35


Reverse Opposite:

p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets157.4 +/- 101.6bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTTTCCTTTTA
ATTTTCCATT--

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTTTTCCTTTTA
-TTTTCCA----

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCCTTTTA
TTACTTCCTNGTN

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTTTTCCTTTTA-----
-----CCTTTTATAGNC

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTTTCCTTTTA
TACTTCCTT---

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTTTCCTTTTA------
-NNTTCCTTTGATCTNNA

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTCCTTTTA
NNTTTTTCTTATNT

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTCCTTTTA--
NNNNTTTTTTTTTNAAC

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTTCCTTTTA
TGTTTACTTT--

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTCCTTTTA
TTTTTTTTCNNGTN-