Information for motif36


Reverse Opposite:

p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.880
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets132.1 +/- 75.6bp
Average Position of motif in Background222.0 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTWTCTG
GCCATCTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTWTCTG--
GCCATCTGTT

MA0594.1_Hoxa9/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTWTCTG--
TGATTTATGGC

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCTWTCTG----
NNNCTGATATCTCNNNN

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTWTCTG--
RCCATMTGTT

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTWTCTG---
TGATTTATGGCC

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTWTCTG---
TGATTTATGGCC

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTWTCTG
NGCTN----

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTWTCTG-----
CCNNACCATCTGGCCTN

MA0485.1_Hoxc9/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTWTCTG---
NTGATTTATGGCC