Information for motif38


Reverse Opposite:

p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.773
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif5.78%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets148.8 +/- 80.0bp
Average Position of motif in Background150.2 +/- 100.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0464.1_Bhlhe40/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAMATGCACC
CTCACGTGCAC-

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAMATGCACC
CACAGCTGCAG-

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAMATGCACC-
-----GCTCCG

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAMATGCACC--
CTCAGCAGCTGCTACTG

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAMATGCACC
AGCAACAGCCGCACC

MA0058.2_MAX/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAMATGCACC
AAGCACATGG---

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAMATGCACC
NGKCACGTGM---

NRF1/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAMATGCACC
GTGCGCATGCGC-

c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAMATGCACC
CCACGTGGNN-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAMATGCACC--
ATCCACAGGTGCGAAAA