Information for motif4


Reverse Opposite:

p-value:1e-21
log p-value:-4.869e+01
Information Content per bp:1.680
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif7.22%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets163.8 +/- 98.2bp
Average Position of motif in Background95.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:YTCAAAASTAGC
DCYAAAAATAGM

MA0497.1_MEF2C/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--YTCAAAASTAGC-
ATGCTAAAAATAGAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YTCAAAASTAGC
ACATCAAAGG----

CHR/Cell-Cycle-Exp/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----YTCAAAASTAGC
CGGTTTCAAA------

MA0052.2_MEF2A/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YTCAAAASTAGC--
AGCTAAAAATAGCAT

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----YTCAAAASTAGC
TATAGATCAAAGGAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YTCAAAASTAGC----
ATGTACAGTAGCAAAG

MA0523.1_TCF7L2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----YTCAAAASTAGC
AAAGATCAAAGGAA--

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YTCAAAASTAGC----
ATTTACAGTAGCAAAA

MA0009.1_T/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YTCAAAASTAGC
TTCACACCTAG-