Information for motif43


Reverse Opposite:

p-value:1e-10
log p-value:-2.389e+01
Information Content per bp:1.764
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets157.7 +/- 75.3bp
Average Position of motif in Background165.5 +/- 47.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TAAACGWT-----
NNTAAAAACGATGTTNT

MA0040.1_Foxq1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAAACGWT-
AATAAACAATN

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAAACGWT------
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAAACGWT------
NNNNTAACGGTTNNNAN

MA0109.1_Hltf/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAAACGWT-
NNATAAGGNN

MA0017.1_NR2F1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAAACGWT--
AGGTTCAAAGGTCA

MA0087.1_Sox5/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAAACGWT
-NAACAAT

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAAACGWT-----
TTAATGTTTAACC

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAACGWT------
TCTCAAAGGTCACCTG

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAACGWT------
TCTCAAAGGTCACGAG