Information for motif47


Reverse Opposite:

p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets134.5 +/- 98.7bp
Average Position of motif in Background241.8 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTCAAGGCTGTT-
-----GGCVGTTR

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCAAGGCTGTT--
----TGGCAGTTGG

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCAAGGCTGTT
NTCAAGGTCA--

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCAAGGCTGTT-----
-NNNTGGCAGTTGGTNN

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCAAGGCTGTT--
----BRRCVGTTDN

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCAAGGCTGTT-----
--CACGGCAGTTGGTNN

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTCAAGGCTGTT
------GCTGTG

MA0100.2_Myb/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCAAGGCTGTT--
----TGGCAGTTGN

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCAAGGCTGTT---
CTACTAGGATGTNNTN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTCAAGGCTGTT
AGCCACTCAAG------