Information for motif48


Reverse Opposite:

p-value:1e-6
log p-value:-1.385e+01
Information Content per bp:1.950
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets166.1 +/- 98.2bp
Average Position of motif in Background145.5 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TACAGATG--
AACAGATGGC

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TACAGATG------
AAGGCCAGATGGTCCGG

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TACAGATG--
AACAKATGGY

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TACAGATG---
-ACAGCTGTTN

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TACAGATG---
-HCAGCTGDTN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TACAGATG---
-ACAGCTGTTV

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TACAGATG
AACAGCTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TACAGATG---
-GCAGCTGTNN

MA0461.1_Atoh1/Jaspar

Match Rank:9
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TACAGATG--
--CAGATGGC

MA0521.1_Tcf12/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TACAGATG---
AACAGCTGCAG