Information for motif5


Reverse Opposite:

p-value:1e-20
log p-value:-4.650e+01
Information Content per bp:1.676
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif8.66%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets152.5 +/- 81.7bp
Average Position of motif in Background109.2 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGGTAGGTG-
-GGGTACGTGC

MA0009.1_T/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGGGTAGGTG----
---CTAGGTGTGAA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGGGTAGGTG---
-----AGGTGTCA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGGTAGGTG--
--NNCAGGTGNN

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGGTAGGTG-------
-GCGGAGGTGTCGCCTC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGGTAGGTG-
CAGGTAAGTAT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGTAGGTG
TGCGTGGGYG

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTAGGTG------
NTNNTTAAGTGGTTANN

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGGGTAGGTG---
GTATTGGGTGGGTAATT

MA0103.2_ZEB1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGGTAGGTG---
----CAGGTGAGG