Information for motif50


Reverse Opposite:

p-value:1e-2
log p-value:-4.800e+00
Information Content per bp:1.665
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets140.0 +/- 73.6bp
Average Position of motif in Background162.8 +/- 75.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGSGGGGGG
GGGGGGGG--

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGGSGGGGGG
GGGGNGGGGC-

PB0097.1_Zfp281_1/Jaspar

Match Rank:3
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GGGSGGGGGG--
GGGGGGGGGGGGGGA

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGGSGGGGGG
GGGGGCGGGGCC

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GGGSGGGGGG-
NANNTGGGGGGGGNGN

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGGSGGGGGG
GGGGGCGGGGC-

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGSGGGGGG
TGGGTGGGGC-

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGGSGGGGGG-
AGGGGGCGGGGCTG

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GGGSGGGGGG--
NNAGGGGCGGGGTNNA

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GGGSGGGGGG-
NNTNNGGGGCGGNGNGN