Information for motif51


Reverse Opposite:

p-value:1e-2
log p-value:-4.616e+00
Information Content per bp:1.856
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets173.2 +/- 77.3bp
Average Position of motif in Background28.5 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CCGTCCCC-----
GGTCCCGCCCCCTTCTC

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CCGTCCCC-----
TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCGTCCCC---
CCCCCGCCCCCGCC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCGTCCCC-
---TCCCCA

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCGTCCCC----
GCCCCGCCCCCTCCC

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCGTCCCC
GCCCCGCCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCGTCCCC
GGCCCCGCCCCC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCCCC---
YCCGCCCACGCN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCGTCCCC
CCCCCCCC

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGTCCCC-
NAGCCCCGCCCCCN