Information for motif8


Reverse Opposite:

p-value:1e-18
log p-value:-4.212e+01
Information Content per bp:1.666
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif6.50%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets148.7 +/- 65.0bp
Average Position of motif in Background102.7 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAACATACAG
AAAAATAACAAACGG

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAACATACAG
TATACATA---

POL007.1_BREd/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAACATACAG
-NANANAC--

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAACATACAG---
ATTTGCATACAATGG

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAACATACAG-----
GACCACATTCATACAAT

MA0025.1_NFIL3/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAACATACAG
ANGTTACATAA--

PB0109.1_Bbx_2/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------TAACATACAG
TGATTGTTAACAGTTGG

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TAACATACAG-
-----CACAGN

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAACATACAG--
AAACAAACANNC

PH0167.1_Tcf1/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------TAACATACAG
CCTTAGTTAACTAAAAT