Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 277)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 355)	% of Background Sequences with Motif
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-2	-6.775e+00	0.2809	43.0	15.52%	35.0	9.85%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e-2	-6.697e+00	0.2809	5.0	1.81%	1.9	0.53%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-2	-6.304e+00	0.2809	119.0	42.96%	122.3	34.43%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-2	-6.120e+00	0.2809	38.0	13.72%	30.1	8.48%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-2	-6.094e+00	0.2809	36.0	13.00%	28.8	8.11%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-2	-6.076e+00	0.2809	33.0	11.91%	25.6	7.21%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-2	-6.011e+00	0.2809	70.0	25.27%	65.7	18.49%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-2	-5.327e+00	0.2809	46.0	16.61%	40.8	11.48%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-2	-5.057e+00	0.2809	17.0	6.14%	11.2	3.15%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-2	-4.901e+00	0.2809	20.0	7.22%	14.4	4.04%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-2	-4.800e+00	0.2809	4.0	1.44%	1.8	0.51%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-1	-4.515e+00	0.2809	47.0	16.97%	43.0	12.11%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-1	-4.482e+00	0.2809	35.0	12.64%	30.1	8.48%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e-1	-4.419e+00	0.2809	14.0	5.05%	9.3	2.62%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1	-4.315e+00	0.2809	65.0	23.47%	64.9	18.27%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-4.313e+00	0.2809	29.0	10.47%	24.0	6.77%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-4.175e+00	0.2809	48.0	17.33%	45.3	12.75%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.853e+00	0.2809	5.0	1.81%	2.3	0.64%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-3.853e+00	0.2809	5.0	1.81%	2.7	0.77%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-3.853e+00	0.2809	5.0	1.81%	2.7	0.77%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-1	-3.769e+00	0.2809	47.0	16.97%	45.1	12.71%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1	-3.755e+00	0.2809	77.0	27.80%	80.7	22.73%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.645e+00	0.2809	80.0	28.88%	84.7	23.85%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-3.588e+00	0.2835	16.0	5.78%	12.6	3.56%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-1	-3.455e+00	0.3109	6.0	2.17%	3.5	0.99%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-3.242e+00	0.3696	7.0	2.53%	4.5	1.27%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-3.200e+00	0.3714	42.0	15.16%	41.5	11.69%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-3.188e+00	0.3714	76.0	27.44%	81.1	22.83%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-3.110e+00	0.3782	53.0	19.13%	54.4	15.32%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-1	-3.056e+00	0.3861	125.0	45.13%	142.3	40.07%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-1	-3.026e+00	0.3861	57.0	20.58%	59.6	16.79%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-2.977e+00	0.3915	44.0	15.88%	44.6	12.55%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-2.968e+00	0.3915	11.0	3.97%	8.2	2.31%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-2.958e+00	0.3915	14.0	5.05%	11.9	3.34%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-2.956e+00	0.3915	12.0	4.33%	9.9	2.79%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-2.707e+00	0.4561	61.0	22.02%	65.4	18.43%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-2.558e+00	0.5152	152.0	54.87%	179.4	50.50%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-1	-2.543e+00	0.5152	18.0	6.50%	16.0	4.51%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-1	-2.525e+00	0.5152	67.0	24.19%	73.3	20.65%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.485e+00	0.5152	51.0	18.41%	54.7	15.42%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-2.473e+00	0.5152	16.0	5.78%	14.4	4.06%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-2.468e+00	0.5152	84.0	30.32%	94.6	26.63%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-1	-2.433e+00	0.5152	5.0	1.81%	3.3	0.92%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-1	-2.423e+00	0.5152	32.0	11.55%	32.5	9.14%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1	-2.379e+00	0.5152	13.0	4.69%	11.3	3.19%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-2.299e+00	0.5366	9.0	3.25%	7.1	2.00%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-2.298e+00	0.5366	8.0	2.89%	6.5	1.83%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-2.292e+00	0.5366	57.0	20.58%	62.4	17.57%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-2.290e+00	0.5366	105.0	37.91%	121.5	34.20%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-2.257e+00	0.5366	92.0	33.21%	105.9	29.81%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-2.215e+00	0.5366	20.0	7.22%	19.2	5.42%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.185e+00	0.5366	39.0	14.08%	41.9	11.81%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.170e+00	0.5366	114.0	41.16%	133.0	37.46%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-2.165e+00	0.5366	44.0	15.88%	47.6	13.40%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-2.127e+00	0.5366	18.0	6.50%	17.4	4.90%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-2.083e+00	0.5470	31.0	11.19%	32.9	9.26%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.070e+00	0.5470	52.0	18.77%	57.8	16.29%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.891e+00	0.6403	43.0	15.52%	47.8	13.47%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.850e+00	0.6556	26.0	9.39%	27.8	7.83%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.820e+00	0.6644	11.0	3.97%	10.2	2.87%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.777e+00	0.6823	10.0	3.61%	9.3	2.61%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.769e+00	0.6823	18.0	6.50%	18.9	5.33%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.769e+00	0.6823	76.0	27.44%	88.8	25.00%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-1.755e+00	0.6823	24.0	8.66%	25.1	7.08%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.737e+00	0.6823	49.0	17.69%	55.4	15.60%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.721e+00	0.6823	17.0	6.14%	17.8	5.00%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.693e+00	0.6823	8.0	2.89%	7.6	2.15%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.693e+00	0.6823	2.0	0.72%	1.7	0.47%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.693e+00	0.6823	2.0	0.72%	1.5	0.41%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.693e+00	0.6823	2.0	0.72%	1.5	0.42%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.632e+00	0.6823	51.0	18.41%	58.0	16.34%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.628e+00	0.6823	37.0	13.36%	42.0	11.81%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.587e+00	0.6895	5.0	1.81%	4.6	1.30%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.579e+00	0.6895	3.0	1.08%	2.3	0.66%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.579e+00	0.6895	3.0	1.08%	2.8	0.79%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.579e+00	0.6895	3.0	1.08%	2.6	0.73%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.579e+00	0.6895	3.0	1.08%	2.6	0.74%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.579e+00	0.6895	3.0	1.08%	2.5	0.70%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.568e+00	0.6895	4.0	1.44%	4.0	1.12%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.562e+00	0.6895	20.0	7.22%	21.4	6.03%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-1.497e+00	0.6895	34.0	12.27%	38.7	10.91%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.467e+00	0.6919	12.0	4.33%	12.2	3.42%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.413e+00	0.7217	17.0	6.14%	18.5	5.22%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-1.358e+00	0.7531	10.0	3.61%	10.1	2.86%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.353e+00	0.7531	26.0	9.39%	29.9	8.43%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-1.349e+00	0.7531	21.0	7.58%	23.6	6.64%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.301e+00	0.7696	9.0	3.25%	10.0	2.81%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.301e+00	0.7696	34.0	12.27%	39.9	11.24%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.301e+00	0.7696	34.0	12.27%	39.7	11.17%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.256e+00	0.7698	14.0	5.05%	15.2	4.27%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.256e+00	0.7698	14.0	5.05%	15.7	4.42%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.234e+00	0.7781	41.0	14.80%	48.6	13.69%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.202e+00	0.7952	13.0	4.69%	14.1	3.98%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.153e+00	0.8266	134.0	48.38%	166.5	46.87%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.152e+00	0.8266	17.0	6.14%	20.0	5.63%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.127e+00	0.8300	70.0	25.27%	85.3	24.03%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.115e+00	0.8312	42.0	15.16%	50.2	14.14%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.115e+00	0.8312	6.0	2.17%	6.8	1.92%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.114e+00	0.8312	46.0	16.61%	55.3	15.56%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.101e+00	0.8312	16.0	5.78%	18.0	5.07%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.093e+00	0.8312	29.0	10.47%	34.4	9.68%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.060e+00	0.8353	24.0	8.66%	28.4	8.00%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.049e+00	0.8365	15.0	5.42%	17.2	4.85%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.028e+00	0.8461	19.0	6.86%	22.1	6.21%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.010e+00	0.8537	27.0	9.75%	32.4	9.13%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-9.966e-01	0.8567	14.0	5.05%	16.6	4.67%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-9.688e-01	0.8726	9.0	3.25%	10.7	3.01%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-9.675e-01	0.8726	4.0	1.44%	4.3	1.21%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-9.675e-01	0.8726	4.0	1.44%	4.2	1.17%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-9.675e-01	0.8726	4.0	1.44%	4.7	1.31%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-9.670e-01	0.8726	30.0	10.83%	36.0	10.15%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-8.980e-01	0.8948	81.0	29.24%	101.7	28.63%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-8.932e-01	0.8948	32.0	11.55%	39.9	11.22%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-8.840e-01	0.8948	47.0	16.97%	58.6	16.51%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-8.829e-01	0.8948	20.0	7.22%	24.7	6.94%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-8.791e-01	0.8948	3.0	1.08%	3.3	0.94%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-7.931e-01	0.9513	33.0	11.91%	42.0	11.82%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-7.706e-01	0.9566	2.0	0.72%	2.3	0.65%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-7.706e-01	0.9566	2.0	0.72%	2.5	0.69%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-7.650e-01	0.9566	6.0	2.17%	7.5	2.10%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-7.607e-01	0.9566	21.0	7.58%	26.2	7.37%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-7.478e-01	0.9566	17.0	6.14%	21.8	6.13%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-7.192e-01	0.9743	20.0	7.22%	25.7	7.25%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-7.105e-01	0.9748	27.0	9.75%	34.5	9.72%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-7.042e-01	0.9748	34.0	12.27%	43.6	12.27%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-6.953e-01	0.9748	23.0	8.30%	30.0	8.44%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.870e-01	0.9748	5.0	1.81%	6.1	1.73%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.870e-01	0.9748	5.0	1.81%	6.1	1.73%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-6.777e-01	0.9748	19.0	6.86%	24.9	7.02%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-6.736e-01	0.9748	65.0	23.47%	83.6	23.54%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-6.565e-01	0.9748	29.0	10.47%	37.5	10.56%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-6.564e-01	0.9748	15.0	5.42%	19.5	5.50%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-6.402e-01	0.9751	39.0	14.08%	50.7	14.27%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-6.336e-01	0.9751	145.0	52.35%	186.3	52.47%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-6.288e-01	0.9751	11.0	3.97%	14.3	4.04%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-6.121e-01	0.9751	1.0	0.36%	0.6	0.18%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-6.121e-01	0.9751	1.0	0.36%	0.8	0.23%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-6.121e-01	0.9751	1.0	0.36%	1.9	0.52%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-6.121e-01	0.9751	1.0	0.36%	0.0	0.00%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.121e-01	0.9751	1.0	0.36%	0.9	0.27%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-5.902e-01	0.9751	58.0	20.94%	75.0	21.12%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-5.774e-01	0.9751	30.0	10.83%	39.2	11.04%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-5.753e-01	0.9751	10.0	3.61%	13.9	3.91%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-5.638e-01	0.9751	13.0	4.69%	17.8	5.01%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-5.432e-01	0.9855	19.0	6.86%	25.4	7.14%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-5.214e-01	1.0000	55.0	19.86%	72.1	20.29%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-5.207e-01	1.0000	9.0	3.25%	12.7	3.58%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-5.207e-01	1.0000	9.0	3.25%	12.2	3.44%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-5.199e-01	1.0000	6.0	2.17%	8.2	2.32%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-5.029e-01	1.0000	3.0	1.08%	4.5	1.28%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-5.029e-01	1.0000	3.0	1.08%	4.9	1.39%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-4.992e-01	1.0000	21.0	7.58%	28.1	7.91%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-4.922e-01	1.0000	37.0	13.36%	49.5	13.93%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-4.847e-01	1.0000	40.0	14.44%	53.4	15.03%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-4.796e-01	1.0000	30.0	10.83%	40.3	11.34%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-4.481e-01	1.0000	5.0	1.81%	7.4	2.09%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-4.415e-01	1.0000	48.0	17.33%	64.5	18.16%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-4.290e-01	1.0000	13.0	4.69%	18.3	5.14%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-4.086e-01	1.0000	40.0	14.44%	54.7	15.41%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-4.076e-01	1.0000	7.0	2.53%	10.7	3.02%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-3.860e-01	1.0000	2.0	0.72%	3.2	0.89%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-3.860e-01	1.0000	2.0	0.72%	3.2	0.91%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-3.747e-01	1.0000	9.0	3.25%	13.2	3.71%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.715e-01	1.0000	4.0	1.44%	6.2	1.75%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-3.711e-01	1.0000	26.0	9.39%	36.8	10.38%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.707e-01	1.0000	23.0	8.30%	32.1	9.04%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-3.706e-01	1.0000	29.0	10.47%	40.2	11.33%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-3.647e-01	1.0000	87.0	31.41%	116.4	32.77%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-3.609e-01	1.0000	70.0	25.27%	94.0	26.47%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-3.267e-01	1.0000	8.0	2.89%	12.2	3.43%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-3.267e-01	1.0000	8.0	2.89%	12.9	3.62%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-3.225e-01	1.0000	13.0	4.69%	19.2	5.39%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-3.225e-01	1.0000	13.0	4.69%	19.8	5.58%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-3.225e-01	1.0000	13.0	4.69%	19.4	5.46%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-3.033e-01	1.0000	38.0	13.72%	53.4	15.03%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-2.961e-01	1.0000	53.0	19.13%	73.8	20.77%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.948e-01	1.0000	148.0	53.43%	196.5	55.34%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-2.888e-01	1.0000	3.0	1.08%	5.9	1.65%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.887e-01	1.0000	5.0	1.81%	8.1	2.27%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-2.887e-01	1.0000	5.0	1.81%	8.6	2.42%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.842e-01	1.0000	43.0	15.52%	60.3	16.99%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-2.698e-01	1.0000	14.0	5.05%	21.1	5.94%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.639e-01	1.0000	19.0	6.86%	28.2	7.95%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.621e-01	1.0000	86.0	31.05%	117.5	33.09%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-2.346e-01	1.0000	1.0	0.36%	2.6	0.73%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.346e-01	1.0000	1.0	0.36%	2.4	0.67%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.346e-01	1.0000	1.0	0.36%	2.3	0.65%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-2.307e-01	1.0000	6.0	2.17%	10.5	2.94%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-2.307e-01	1.0000	6.0	2.17%	10.7	3.00%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.272e-01	1.0000	4.0	1.44%	7.4	2.07%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.146e-01	1.0000	17.0	6.14%	26.4	7.44%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.114e-01	1.0000	75.0	27.08%	104.0	29.29%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.066e-01	1.0000	41.0	14.80%	59.0	16.63%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-2.034e-01	1.0000	128.0	46.21%	173.7	48.91%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.986e-01	1.0000	2.0	0.72%	4.5	1.26%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.986e-01	1.0000	2.0	0.72%	5.0	1.39%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.923e-01	1.0000	21.0	7.58%	32.1	9.05%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.833e-01	1.0000	5.0	1.81%	9.0	2.54%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.833e-01	1.0000	5.0	1.81%	9.2	2.60%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.708e-01	1.0000	44.0	15.88%	64.2	18.09%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.617e-01	1.0000	17.0	6.14%	27.5	7.74%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.540e-01	1.0000	10.0	3.61%	17.1	4.82%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.534e-01	1.0000	66.0	23.83%	94.1	26.48%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.501e-01	1.0000	6.0	2.17%	11.4	3.22%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.498e-01	1.0000	45.0	16.25%	66.1	18.61%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.472e-01	1.0000	14.0	5.05%	23.1	6.50%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.423e-01	1.0000	16.0	5.78%	26.7	7.52%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.400e-01	1.0000	106.0	38.27%	147.7	41.59%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.369e-01	1.0000	4.0	1.44%	8.3	2.33%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.339e-01	1.0000	25.0	9.03%	39.9	11.24%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.263e-01	1.0000	54.0	19.49%	79.4	22.35%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.075e-01	1.0000	12.0	4.33%	21.4	6.02%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.031e-01	1.0000	25.0	9.03%	40.5	11.41%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.025e-01	1.0000	2.0	0.72%	5.8	1.64%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-9.276e-02	1.0000	3.0	1.08%	7.9	2.22%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-9.276e-02	1.0000	3.0	1.08%	7.9	2.21%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-9.046e-02	1.0000	44.0	15.88%	67.5	19.02%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-8.117e-02	1.0000	4.0	1.44%	9.4	2.64%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-8.117e-02	1.0000	4.0	1.44%	9.1	2.56%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-5.297e-02	1.0000	22.0	7.94%	38.9	10.96%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-5.264e-02	1.0000	2.0	0.72%	6.6	1.85%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-4.894e-02	1.0000	10.0	3.61%	20.1	5.67%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-4.894e-02	1.0000	10.0	3.61%	20.2	5.69%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-4.227e-02	1.0000	5.0	1.81%	12.2	3.42%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-4.182e-02	1.0000	36.0	13.00%	60.0	16.88%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-3.251e-02	1.0000	7.0	2.53%	16.8	4.72%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-3.061e-02	1.0000	173.0	62.45%	240.1	67.60%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-3.023e-02	1.0000	31.0	11.19%	53.1	14.96%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-2.766e-02	1.0000	11.0	3.97%	23.2	6.52%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-2.677e-02	1.0000	2.0	0.72%	7.4	2.08%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.720e-02	1.0000	14.0	5.05%	29.2	8.23%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.348e-02	1.0000	6.0	2.17%	16.0	4.51%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-8.940e-03	1.0000	1.0	0.36%	6.7	1.88%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-5.181e-03	1.0000	19.0	6.86%	40.4	11.38%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-3.600e-03	1.0000	13.0	4.69%	31.2	8.77%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-2.274e-03	1.0000	19.0	6.86%	42.4	11.95%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-4.680e-04	1.0000	26.0	9.39%	57.4	16.15%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.30%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	2.6	0.74%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	1.0	0.29%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	2.4	0.66%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.46%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.6	0.18%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.26%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	1.0	0.29%