Information for motif1


Reverse Opposite:

p-value:1e-41
log p-value:-9.506e+01
Information Content per bp:1.758
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets171.5 +/- 80.8bp
Average Position of motif in Background121.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AGCCACCCCA----
ATCCCCGCCCCTAAAA

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGCCACCCCA---
ANNTNCCCACCCANNAC

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACCCCA-----
NNNTCCATCCCATAANN

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGCCACCCCA--
ACTATGCCAACCTACC

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCACCCCA----
AAGCCCCCCAAAAAT

MA0595.1_SREBF1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCCACCCCA-
-ATCACCCCAC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCCACCCCA-
-ATCACCCCAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCCACCCCA-
CNGTCACGCCAC

MA0596.1_SREBF2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGCCACCCCA-
-ATCACCCCAT

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCCACCCCA
ATCCAC----