Information for motif11


Reverse Opposite:

p-value:1e-24
log p-value:-5.566e+01
Information Content per bp:1.683
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets140.9 +/- 90.4bp
Average Position of motif in Background153.8 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AAAATAAACA
-AAATAAACA

MA0040.1_Foxq1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AAAATAAACA---
--AATAAACAATN

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAATAAACA
TCCAATCCACA

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AAAATAAACA--
SSAATCCACANN

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAATAAACA------
AAAGTAAACAAAAATT

MA0042.1_FOXI1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AAAATAAACA---
-AAACAAACANNC

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAATAAACA-----
AAAAAGTAAACAAACAC

MA0030.1_FOXF2/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAATAAACA--
CAAACGTAAACAAT

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAAATAAACA---
-AAACAAACATTC

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAAATAAACA--
-AAGTAAACAAA