Information for motif12


Reverse Opposite:

p-value:1e-24
log p-value:-5.566e+01
Information Content per bp:1.813
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets166.2 +/- 83.2bp
Average Position of motif in Background155.0 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----WTTTGTTC----
TNNTCCTTTGTTCTNNT

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----WTTTGTTC----
NNNTCCTTTGTTCTNNN

MA0514.1_Sox3/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTTC-
CCTTTGTTTT

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:WTTTGTTC
-ATTGTT-

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTTC-
CCATTGTTNY

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----WTTTGTTC-----
AATCAATTGTTCCGCTA

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----WTTTGTTC----
NNTTTATTGTTCTNNN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-WTTTGTTC-----
TTTTTTTTCNNGTN

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----WTTTGTTC----
ANNTCTATTGTTCNNNA

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-WTTTGTTC-----
TAATTGTTCTAAAC