Information for motif16


Reverse Opposite:

p-value:1e-21
log p-value:-4.872e+01
Information Content per bp:1.656
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif8.36%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets159.2 +/- 80.0bp
Average Position of motif in Background140.6 +/- 107.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAGAATGTGA
CNGAGGAATGTG-

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AAGAATGTGA--
NTTNTATGAATGTGNNC

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AAGAATGTGA
NNTNTCATGAATGT--

MA0087.1_Sox5/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATGTGA
NAACAAT----

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGAATGTGA
CCWGGAATGY--

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGAATGTGA-
ACAGGATGTGGT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGAATGTGA
NCTGGAATGC--

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGAATGTGA
AACAAT----

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGAATGTGA-
AAGGATATNTN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGAATGTGA----
--GAAAGTGAAAGT