Information for motif17


Reverse Opposite:

p-value:1e-21
log p-value:-4.872e+01
Information Content per bp:1.919
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif8.36%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets143.7 +/- 92.5bp
Average Position of motif in Background164.7 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0508.1_PRDM1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGTGAAGTTGAG
AGAAAGTGAAAGTGA-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTGAAGTTGAG
--TGACGT----

MA0122.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTGAAGTTGAG
TTAAGTGGA------

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAAGTTGAG
GAAAGTGAAAGT---

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGTGAAGTTGAG
--NGAAGC----

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAAGTTGAG----
WNAGTCADAVTGAAACTN

MA0592.1_ESRRA/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGTGAAGTTGAG
NGTGACCTTGG-

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AGTGAAGTTGAG
TAATTCAATGAAGTG---

MA0141.2_Esrrb/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGTGAAGTTGAG--
--TGACCTTGANNN

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGTGAAGTTGAG
-NTGACCTTGA-