Information for motif25


Reverse Opposite:

p-value:1e-19
log p-value:-4.423e+01
Information Content per bp:1.555
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif9.19%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets119.5 +/- 89.6bp
Average Position of motif in Background119.7 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCACATTC
CACAGCTGCAG----

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AGCTGCACATTC
CTCAGCAGCTGCTACTG-

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCACATTC
NNACAGCTGC------

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCACATTC--
CAGATGTGCACATACGT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCACATTC
CAGCAGCTGN------

MA0500.1_Myog/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCACATTC
GACAGCTGCAG----

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTGCACATTC
NNAGCAGCTGCT-----

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCACATTC
AACAGCTGCAG----

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCACATTC
TGCAGCTGTCCCT--

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCACATTC
NAACAGCTGT------