Information for motif28


Reverse Opposite:

p-value:1e-15
log p-value:-3.662e+01
Information Content per bp:1.661
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif6.96%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets159.1 +/- 95.8bp
Average Position of motif in Background167.5 +/- 47.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0462.1_BATF::JUN/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATTTCA
TGAGTCATTTC-

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGTCATTTCA
-GTCATN---

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATTTCA-
ATGAGTCATNTNNT

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTCATTTCA
AGTCACGC--

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATTTCA----
TNNNATGATTTCNNCNN

MA0476.1_FOS/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGTCATTTCA
TGTGACTCATT---

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTCATTTCA--
ACATTCATGACACG

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTCATTTCA---
-GGGATTGCATNN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATTTCA-
GTTTCACTTCCG

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATTTCA
CNGTGATTTN-