Information for motif29


Reverse Opposite:

p-value:1e-15
log p-value:-3.662e+01
Information Content per bp:1.586
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif6.96%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets121.2 +/- 93.6bp
Average Position of motif in Background61.7 +/- 86.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATGCKG------
NNNNATGCGGGTNNNN

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAATGCKG-----
NNTCCTGCTGTGNNN

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAATGCKG-----
TCNCCTGCTGNGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAATGCKG-----
TNTCCTGCTGTGNNG

MA0496.1_MAFK/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAATGCKG------
AAANTGCTGACTNAG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAATGCKG-----
AAAWWTGCTGACWWD

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAATGCKG
TAATCCCN

MA0495.1_MAFF/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAATGCKG-------
NAAAANTGCTGACTCAGC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAATGCKG-----
---TGCTGACTCA

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAATGCKG----
NNNATTAATCCGNTTNA