Information for motif30


Reverse Opposite:

p-value:1e-14
log p-value:-3.432e+01
Information Content per bp:1.600
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif6.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets166.6 +/- 78.9bp
Average Position of motif in Background84.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTGACTC
NNCAGGTGNN--

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTGACTC
NTGCAGCTGTG--

MA0464.1_Bhlhe40/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTGACTC
NTGCACGTGAG--

MA0103.2_ZEB1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGCAGGTGACTC
--CAGGTGAGG-

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGCAGGTGACTC
-GCAGCTGTNN-

MA0526.1_USF2/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCAGGTGACTC
GTCATGTGACC-

MA0093.2_USF1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCAGGTGACTC
GCCACGTGACC-

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCAGGTGACTC
-KCACGTGMCN-

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCAGGTGACTC
KCCACGTGAC--

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGCAGGTGACTC
---AGGTGTCA-