Information for motif31


Reverse Opposite:

p-value:1e-14
log p-value:-3.402e+01
Information Content per bp:1.729
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif8.91%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets153.8 +/- 86.7bp
Average Position of motif in Background134.5 +/- 103.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTGCCGTA----
GGGTGTGCCCAAAAGG

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGCCGTA
-TGACGT-

MA0160.1_NR4A2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGCCGTA
GTGACCTT

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGCCGTA-
CTGCCCGCA

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGCCGTA
TACGTGCV---

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------GTGCCGTA
NNNNTTGTGTGCTTNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCCGTA---
GNNATTTGTCGTAANN

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGCCGTA------
TCTTTGGCGTACCCTAA

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------GTGCCGTA
NNGCGTGTGTGCNGCN

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTGCCGTA------
NTGCCCTAGGGCAA