Information for motif34


Reverse Opposite:

p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.441
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets152.7 +/- 72.8bp
Average Position of motif in Background140.4 +/- 93.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0058.2_MAX/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CTTACCATGTGA--
----CCATGTGCTT

MA0526.1_USF2/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CTTACCATGTGA--
---GTCATGTGACC

MA0147.2_Myc/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CTTACCATGTGA--
----CCATGTGCTT

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTTACCATGTGA-
---ACCACGTGAC

MA0093.2_USF1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTTACCATGTGA--
---GCCACGTGACC

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTTACCATGTGA-
---KCCACGTGAC

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTTACCATGTGA
---ACCACGTG-

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTACCATGTGA---
NNTTTTACATGTANNNT

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTACCATGTGA---
-TTGCCATGGCAACC

MA0104.3_Mycn/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTACCATGTGA
---GCCACGTG-