Information for motif35


Reverse Opposite:

p-value:1e-12
log p-value:-2.769e+01
Information Content per bp:1.736
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif6.96%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets136.3 +/- 86.2bp
Average Position of motif in Background186.4 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGCTGCS
-NGCTN--

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGCS
CAGCAGCTGN-

MA0048.1_NHLH1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGCS-
NCGCAGCTGCGN

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGCS-
GACAGCTGCAG

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTGCS------
NCCGTTGCTANGNGN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTGCS-
GCAGCTGTNN

MA0521.1_Tcf12/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGCS-
AACAGCTGCAG

MA0499.1_Myod1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCTGCS
NGNGACAGCTGCN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGCTGCS
NNAGCAGCTGCT

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGCTGCS-------
NCGACCGCTCCGCTCGAAA