Information for motif37


Reverse Opposite:

p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.856
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.46%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets163.2 +/- 93.7bp
Average Position of motif in Background201.3 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TGTGAATGWG---
NTTNTATGAATGTGNNC

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGAATGWG
NNTNTCATGAATGT-

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTGAATGWG----
ACTATGAATGAATGAT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTGAATGWG
AGGTGTTAAT---

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTGAATGWG-----
GACGATAATGAGCTTGC

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTGAATGWG
AGGTGTGAAM---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATGWG
CSTGGGAAAD--

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TGTGAATGWG
GAAAAGGTGTGAAAATT

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATGWG-
AGAAAGTGAAAGTGA

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTGAATGWG
GAAAGTGAAAGT-