Information for motif4


Reverse Opposite:

p-value:1e-26
log p-value:-6.108e+01
Information Content per bp:1.726
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif12.53%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets173.7 +/- 81.9bp
Average Position of motif in Background240.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTGGAG-
GGGAATTGTAGT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGATTTGGAG
ACAGGATGTGGT-

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGATTTGGAG-----
-----GGGAGGACNG

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGATTTGGAG-
-----CGGAGC

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGATTTGGAG--
NATNGGGNGGGGANAN

GFY-Staf/Promoters/Homer

Match Rank:6
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------GGATTTGGAG--
GCATTCTGGGAATTGTAGTT

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGATTTGGAG
----GTGGAT

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGATTTGGAG---
TGCGGAGTGGGACTGG

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGATTTGGAG-------
NTNNNAGGAGTCTCNTN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGATTTGGAG
GGGGGGGG--