Information for motif40


Reverse Opposite:

p-value:1e-10
log p-value:-2.351e+01
Information Content per bp:1.674
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets174.0 +/- 82.6bp
Average Position of motif in Background176.6 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGTAGTG--
NNANTGGTGGTCTTNNN

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTAGTG
AGGTGTTAAT-

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTGGTAGTG
AGAGGAAGTG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTGGTAGTG
AGGTGTCA---

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTAGTG
NNHTGTGGTTWN-

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTGGTAGTG
-GTGGAT---

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGTGGTAGTG--
--TGGGTGTGGC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTGGTAGTG
NGCGTGGGCGGR

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGTGGTAGTG
NNCAGGTGNN----

MA0080.3_Spi1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGTGGTAGTG-
AAAAAGAGGAAGTGA