Information for motif43


Reverse Opposite:

p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets159.7 +/- 90.9bp
Average Position of motif in Background164.8 +/- 48.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0153.1_HNF1B/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ATCTGTTAAACA----
----GTTAAATATTAA

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATCTGTTAAACA---
---NDGTAAACARRN

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:ATCTGTTAAACA-
-----GTAAACAT

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATCTGTTAAACA---
NNNNCTGTTAACNNTNN

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATCTGTTAAACA
----TGTAAACA

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTTAAACA
AAAGACCTGTCAATCC

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTTAAACA
AACTAGCTGTCAATAC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCTGTTAAACA
GCCATCTGTT-----

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTTAAACA
AACGAGCTGTCAATAC

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATCTGTTAAACA--
---AAGTAAACAAA