Information for motif44


Reverse Opposite:

p-value:1e-5
log p-value:-1.275e+01
Information Content per bp:1.879
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.29%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets135.5 +/- 88.8bp
Average Position of motif in Background138.4 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--WSACACAT
KTTCACACCT

MA0058.2_MAX/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:WSACACAT--
AAGCACATGG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:WSACACAT
TGACACCT

MA0009.1_T/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-WSACACAT--
TTCACACCTAG

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----WSACACAT----
NNTTTTCACACCTTNNN

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:WSACACAT--
AAGCACATGG

MA0491.1_JUND/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--WSACACAT-
GGTGACTCATC

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----WSACACAT----
AGCGGCACACACGCAA

MA0464.1_Bhlhe40/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WSACACAT----
-CTCACGTGCAC

MA0462.1_BATF::JUN/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WSACACAT---
TGAGTCATTTC