Information for motif5


Reverse Opposite:

p-value:1e-25
log p-value:-5.886e+01
Information Content per bp:1.826
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif7.52%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets167.1 +/- 90.4bp
Average Position of motif in Background222.2 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATATTCATAT
ATTTGCATAT

MA0507.1_POU2F2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATATTCATAT
TTCATTTGCATAT

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ATATTCATAT---
GACCACATTCATACAAT

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATATTCATAT----
ACATTCATGACACG

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ATATTCATAT---
TNNATTATGCATANNTT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATATTCATAT
ATTTGCATAA

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATATTCATAT--
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATATTCATAT--
TNTAATTTGCATACNA

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATATTCATAT-
CTAATATTGCTAAA

MA0033.1_FOXL1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATATTCATAT
-TATACATA-