Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 359)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 268)	% of Background Sequences with Motif
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-5	-1.288e+01	0.0006	33.0	9.19%	10.9	4.06%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-4	-1.144e+01	0.0013	9.0	2.51%	1.5	0.57%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-4	-1.058e+01	0.0021	53.0	14.76%	22.8	8.51%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-3	-7.906e+00	0.0227	42.0	11.70%	18.8	7.01%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e-2	-6.578e+00	0.0684	16.0	4.46%	5.8	2.17%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-2	-6.304e+00	0.0750	29.0	8.08%	12.7	4.73%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-2	-6.080e+00	0.0804	39.0	10.86%	18.8	7.03%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-2	-5.984e+00	0.0804	6.0	1.67%	0.7	0.25%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-2	-5.102e+00	0.1664	64.0	17.83%	35.3	13.17%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-2	-5.096e+00	0.1664	8.0	2.23%	2.9	1.07%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-2	-5.096e+00	0.1664	8.0	2.23%	2.0	0.75%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-2	-5.064e+00	0.1664	20.0	5.57%	8.4	3.14%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-2	-4.827e+00	0.1664	10.0	2.79%	3.9	1.45%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-2	-4.804e+00	0.1664	35.0	9.75%	17.0	6.36%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-2	-4.777e+00	0.1664	14.0	3.90%	5.2	1.94%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-2	-4.770e+00	0.1664	43.0	11.98%	22.4	8.35%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1	-4.330e+00	0.1905	71.0	19.78%	41.2	15.36%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-1	-4.250e+00	0.1950	24.0	6.69%	11.5	4.30%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-3.943e+00	0.2510	7.0	1.95%	2.6	0.96%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-3.884e+00	0.2529	11.0	3.06%	5.0	1.85%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e-1	-3.795e+00	0.2635	50.0	13.93%	28.9	10.80%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e-1	-3.688e+00	0.2797	23.0	6.41%	11.9	4.45%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-1	-3.236e+00	0.4208	12.0	3.34%	6.0	2.22%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-1	-2.971e+00	0.4848	8.0	2.23%	3.6	1.35%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e-1	-2.971e+00	0.4848	8.0	2.23%	3.3	1.22%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-1	-2.971e+00	0.4848	8.0	2.23%	3.6	1.34%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-2.950e+00	0.4848	71.0	19.78%	44.1	16.46%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-1	-2.927e+00	0.4848	235.0	65.46%	164.9	61.51%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-2.912e+00	0.4848	6.0	1.67%	2.3	0.87%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-1	-2.912e+00	0.4848	6.0	1.67%	2.7	0.99%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-1	-2.763e+00	0.5009	86.0	23.96%	55.6	20.76%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.734e+00	0.5009	35.0	9.75%	20.9	7.79%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-1	-2.612e+00	0.5470	64.0	17.83%	40.2	15.02%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-2.587e+00	0.5470	45.0	12.53%	27.1	10.10%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-1	-2.570e+00	0.5470	11.0	3.06%	5.3	1.99%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-2.492e+00	0.5654	19.0	5.29%	10.6	3.94%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-1	-2.471e+00	0.5654	143.0	39.83%	97.2	36.27%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-1	-2.404e+00	0.5852	25.0	6.96%	14.7	5.47%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-2.390e+00	0.5852	14.0	3.90%	7.9	2.93%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-1	-2.381e+00	0.5852	9.0	2.51%	4.7	1.75%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-2.264e+00	0.6236	41.0	11.42%	25.4	9.48%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.246e+00	0.6236	64.0	17.83%	41.8	15.60%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.209e+00	0.6280	61.0	16.99%	39.2	14.61%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-2.207e+00	0.6280	29.0	8.08%	17.3	6.47%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-2.188e+00	0.6280	12.0	3.34%	6.5	2.44%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.034e+00	0.6999	27.0	7.52%	16.8	6.27%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.033e+00	0.6999	21.0	5.85%	12.3	4.57%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-2.016e+00	0.6999	98.0	27.30%	66.2	24.72%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-2.015e+00	0.6999	5.0	1.39%	2.4	0.90%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.015e+00	0.6999	5.0	1.39%	2.6	0.98%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.005e+00	0.6999	120.0	33.43%	82.5	30.79%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.979e+00	0.6999	10.0	2.79%	5.1	1.92%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.938e+00	0.6999	121.0	33.70%	83.7	31.23%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-1.885e+00	0.6999	3.0	0.84%	1.0	0.39%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.885e+00	0.6999	3.0	0.84%	0.0	0.00%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-1.885e+00	0.6999	3.0	0.84%	0.0	0.00%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.885e+00	0.6999	3.0	0.84%	1.7	0.65%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-1.800e+00	0.7011	55.0	15.32%	36.7	13.68%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.765e+00	0.7136	32.0	8.91%	20.2	7.54%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.757e+00	0.7136	80.0	22.28%	55.0	20.52%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.711e+00	0.7286	26.0	7.24%	16.5	6.17%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.568e+00	0.8268	101.0	28.13%	70.1	26.15%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.528e+00	0.8470	6.0	1.67%	3.4	1.27%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-1.511e+00	0.8485	41.0	11.42%	27.7	10.35%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.457e+00	0.8812	28.0	7.80%	18.4	6.88%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.420e+00	0.9009	25.0	6.96%	16.1	6.01%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.384e+00	0.9203	53.0	14.76%	36.5	13.61%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.316e+00	0.9704	98.0	27.30%	69.2	25.83%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.311e+00	0.9704	16.0	4.46%	10.8	4.02%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.294e+00	0.9704	33.0	9.19%	22.1	8.24%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.269e+00	0.9704	4.0	1.11%	2.7	1.02%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.269e+00	0.9704	4.0	1.11%	2.4	0.90%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.250e+00	0.9704	10.0	2.79%	6.1	2.26%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.234e+00	0.9704	7.0	1.95%	4.4	1.63%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.222e+00	0.9704	20.0	5.57%	13.4	5.00%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.222e+00	0.9704	20.0	5.57%	13.7	5.11%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-1.222e+00	0.9704	20.0	5.57%	13.6	5.08%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.222e+00	0.9704	20.0	5.57%	13.2	4.92%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.214e+00	0.9704	41.0	11.42%	28.7	10.72%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.201e+00	0.9704	197.0	54.87%	143.5	53.54%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.179e+00	0.9704	170.0	47.35%	123.8	46.17%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.177e+00	0.9704	56.0	15.60%	39.6	14.77%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-1.154e+00	0.9704	105.0	29.25%	75.4	28.12%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.131e+00	0.9704	14.0	3.90%	10.0	3.72%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.096e+00	0.9704	39.0	10.86%	27.3	10.20%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.083e+00	0.9704	11.0	3.06%	7.5	2.80%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.033e+00	1.0000	8.0	2.23%	5.2	1.93%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-9.813e-01	1.0000	5.0	1.39%	3.2	1.18%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-9.484e-01	1.0000	2.0	0.56%	1.6	0.61%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-9.484e-01	1.0000	2.0	0.56%	0.8	0.31%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-9.484e-01	1.0000	2.0	0.56%	0.0	0.00%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-9.484e-01	1.0000	2.0	0.56%	0.8	0.28%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-9.484e-01	1.0000	2.0	0.56%	1.4	0.52%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-9.484e-01	1.0000	2.0	0.56%	0.7	0.26%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-9.473e-01	1.0000	45.0	12.53%	32.8	12.24%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-9.058e-01	1.0000	16.0	4.46%	12.0	4.47%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-9.038e-01	1.0000	42.0	11.70%	30.4	11.34%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-8.879e-01	1.0000	31.0	8.64%	22.2	8.27%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-8.850e-01	1.0000	9.0	2.51%	6.3	2.33%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-8.763e-01	1.0000	20.0	5.57%	14.8	5.52%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-8.427e-01	1.0000	13.0	3.62%	9.7	3.61%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-8.427e-01	1.0000	13.0	3.62%	9.0	3.36%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-7.705e-01	1.0000	10.0	2.79%	7.0	2.62%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-7.676e-01	1.0000	33.0	9.19%	24.2	9.01%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-7.407e-01	1.0000	18.0	5.01%	13.2	4.91%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-7.105e-01	1.0000	38.0	10.58%	28.1	10.49%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-6.894e-01	1.0000	3.0	0.84%	2.8	1.03%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-6.894e-01	1.0000	3.0	0.84%	2.1	0.78%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-6.894e-01	1.0000	3.0	0.84%	2.4	0.89%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-6.825e-01	1.0000	7.0	1.95%	5.4	2.03%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.825e-01	1.0000	7.0	1.95%	5.2	1.93%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-6.825e-01	1.0000	7.0	1.95%	5.4	2.01%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-6.789e-01	1.0000	11.0	3.06%	8.1	3.03%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-6.789e-01	1.0000	11.0	3.06%	8.1	3.02%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-6.716e-01	1.0000	23.0	6.41%	17.6	6.57%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-6.626e-01	1.0000	43.0	11.98%	32.3	12.07%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-6.565e-01	1.0000	59.0	16.43%	44.4	16.56%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-6.522e-01	1.0000	71.0	19.78%	53.4	19.94%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-6.191e-01	1.0000	28.0	7.80%	21.7	8.08%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-6.174e-01	1.0000	24.0	6.69%	18.1	6.74%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-6.107e-01	1.0000	183.0	50.97%	137.5	51.29%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-6.105e-01	1.0000	16.0	4.46%	12.1	4.53%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-6.036e-01	1.0000	12.0	3.34%	9.7	3.61%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-5.686e-01	1.0000	25.0	6.96%	19.3	7.21%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-5.599e-01	1.0000	4.0	1.11%	4.0	1.48%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-5.599e-01	1.0000	4.0	1.11%	3.8	1.42%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-5.566e-01	1.0000	74.0	20.61%	56.4	21.04%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-5.552e-01	1.0000	66.0	18.38%	50.4	18.81%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-5.299e-01	1.0000	87.0	24.23%	66.4	24.77%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-5.156e-01	1.0000	22.0	6.13%	17.1	6.38%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.754e-01	1.0000	5.0	1.39%	4.4	1.65%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.754e-01	1.0000	5.0	1.39%	4.4	1.65%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-4.720e-01	1.0000	40.0	11.14%	31.6	11.79%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-4.606e-01	1.0000	10.0	2.79%	8.6	3.20%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-4.480e-01	1.0000	28.0	7.80%	22.1	8.25%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-4.474e-01	1.0000	45.0	12.53%	35.8	13.36%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-4.253e-01	1.0000	33.0	9.19%	26.4	9.84%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-4.148e-01	1.0000	29.0	8.08%	23.6	8.82%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-4.136e-01	1.0000	6.0	1.67%	5.0	1.87%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-3.940e-01	1.0000	165.0	45.96%	126.1	47.04%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-3.929e-01	1.0000	47.0	13.09%	37.7	14.08%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-3.803e-01	1.0000	56.0	15.60%	44.3	16.52%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-3.775e-01	1.0000	39.0	10.86%	31.0	11.58%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-3.645e-01	1.0000	17.0	4.74%	14.7	5.47%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-3.452e-01	1.0000	49.0	13.65%	39.6	14.79%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-3.425e-01	1.0000	36.0	10.03%	29.8	11.12%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-3.331e-01	1.0000	18.0	5.01%	15.9	5.92%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-3.261e-01	1.0000	8.0	2.23%	7.8	2.91%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-3.261e-01	1.0000	8.0	2.23%	7.1	2.67%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-3.189e-01	1.0000	37.0	10.31%	30.7	11.46%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-3.051e-01	1.0000	19.0	5.29%	16.9	6.29%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-3.029e-01	1.0000	1.0	0.28%	0.8	0.28%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-3.029e-01	1.0000	1.0	0.28%	0.0	0.00%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-3.029e-01	1.0000	1.0	0.28%	1.7	0.63%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-3.029e-01	1.0000	1.0	0.28%	0.0	0.00%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-3.029e-01	1.0000	1.0	0.28%	1.6	0.61%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-3.029e-01	1.0000	1.0	0.28%	0.7	0.25%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-3.029e-01	1.0000	1.0	0.28%	0.0	0.00%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-3.029e-01	1.0000	1.0	0.28%	0.0	0.00%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-3.029e-01	1.0000	1.0	0.28%	0.0	0.00%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-3.006e-01	1.0000	106.0	29.53%	83.8	31.25%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.973e-01	1.0000	60.0	16.71%	48.9	18.26%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.936e-01	1.0000	29.0	8.08%	24.5	9.14%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-2.894e-01	1.0000	2.0	0.56%	2.0	0.75%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.894e-01	1.0000	2.0	0.56%	2.7	1.01%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-2.779e-01	1.0000	15.0	4.18%	13.5	5.03%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-2.773e-01	1.0000	25.0	6.96%	22.0	8.20%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-2.769e-01	1.0000	39.0	10.86%	32.8	12.25%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-2.662e-01	1.0000	3.0	0.84%	3.9	1.45%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-2.662e-01	1.0000	3.0	0.84%	3.0	1.13%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.662e-01	1.0000	3.0	0.84%	3.5	1.32%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-2.662e-01	1.0000	3.0	0.84%	3.3	1.22%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-2.435e-01	1.0000	4.0	1.11%	4.0	1.50%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-2.411e-01	1.0000	11.0	3.06%	10.6	3.97%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-2.370e-01	1.0000	22.0	6.13%	19.9	7.42%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.293e-01	1.0000	90.0	25.07%	72.1	26.88%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.229e-01	1.0000	5.0	1.39%	5.7	2.12%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.225e-01	1.0000	82.0	22.84%	66.5	24.83%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.217e-01	1.0000	99.0	27.58%	79.3	29.60%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.093e-01	1.0000	43.0	11.98%	36.3	13.54%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.982e-01	1.0000	134.0	37.33%	107.0	39.92%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.965e-01	1.0000	19.0	5.29%	17.2	6.40%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.965e-01	1.0000	19.0	5.29%	17.6	6.56%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.863e-01	1.0000	63.0	17.55%	52.2	19.46%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.861e-01	1.0000	179.0	49.86%	140.4	52.39%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.694e-01	1.0000	15.0	4.18%	14.1	5.28%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.637e-01	1.0000	65.0	18.11%	54.6	20.35%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.540e-01	1.0000	22.0	6.13%	20.3	7.57%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.452e-01	1.0000	53.0	14.76%	46.0	17.15%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.355e-01	1.0000	11.0	3.06%	11.3	4.20%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.127e-01	1.0000	47.0	13.09%	41.4	15.45%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-1.008e-01	1.0000	3.0	0.84%	4.1	1.54%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-1.008e-01	1.0000	3.0	0.84%	4.2	1.58%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.008e-01	1.0000	3.0	0.84%	4.2	1.58%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-9.978e-02	1.0000	5.0	1.39%	6.3	2.35%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-9.394e-02	1.0000	34.0	9.47%	31.8	11.86%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-9.075e-02	1.0000	45.0	12.53%	40.1	14.97%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-8.998e-02	1.0000	23.0	6.41%	22.4	8.34%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-8.573e-02	1.0000	17.0	4.74%	17.2	6.42%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-7.959e-02	1.0000	18.0	5.01%	18.9	7.04%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-7.758e-02	1.0000	10.0	2.79%	11.2	4.17%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-7.727e-02	1.0000	31.0	8.64%	29.0	10.84%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-6.849e-02	1.0000	12.0	3.34%	13.2	4.91%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-6.423e-02	1.0000	13.0	3.62%	14.7	5.48%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-6.423e-02	1.0000	13.0	3.62%	14.9	5.57%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-6.175e-02	1.0000	34.0	9.47%	32.1	11.98%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-6.019e-02	1.0000	14.0	3.90%	15.1	5.62%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-5.907e-02	1.0000	56.0	15.60%	50.1	18.69%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-5.273e-02	1.0000	16.0	4.46%	17.8	6.63%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.617e-02	1.0000	144.0	40.11%	119.2	44.47%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-4.404e-02	1.0000	60.0	16.71%	54.2	20.24%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-4.248e-02	1.0000	5.0	1.39%	7.1	2.63%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-4.147e-02	1.0000	45.0	12.53%	43.0	16.04%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.072e-02	1.0000	9.0	2.51%	12.0	4.47%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-3.975e-02	1.0000	51.0	14.21%	47.7	17.81%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-3.717e-02	1.0000	77.0	21.45%	68.9	25.72%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-3.662e-02	1.0000	41.0	11.42%	39.7	14.81%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-3.662e-02	1.0000	3.0	0.84%	5.3	1.98%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-3.590e-02	1.0000	12.0	3.34%	14.1	5.24%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-3.489e-02	1.0000	58.0	16.16%	54.0	20.15%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-3.156e-02	1.0000	124.0	34.54%	106.0	39.53%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-3.068e-02	1.0000	15.0	4.18%	17.4	6.49%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.956e-02	1.0000	2.0	0.56%	4.7	1.76%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-2.956e-02	1.0000	2.0	0.56%	4.0	1.49%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.599e-02	1.0000	72.0	20.06%	65.9	24.58%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-2.476e-02	1.0000	27.0	7.52%	28.7	10.71%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.059e-02	1.0000	75.0	20.89%	68.3	25.49%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.887e-02	1.0000	66.0	18.38%	61.7	23.00%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.744e-02	1.0000	67.0	18.66%	62.9	23.46%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.613e-02	1.0000	33.0	9.19%	34.4	12.82%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.465e-02	1.0000	53.0	14.76%	51.1	19.08%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-9.988e-03	1.0000	46.0	12.81%	46.7	17.41%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-9.531e-03	1.0000	33.0	9.19%	35.2	13.12%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-8.718e-03	1.0000	12.0	3.34%	16.0	5.99%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-8.698e-03	1.0000	9.0	2.51%	13.8	5.14%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-7.674e-03	1.0000	28.0	7.80%	31.7	11.83%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-4.444e-03	1.0000	36.0	10.03%	39.7	14.81%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-4.241e-03	1.0000	28.0	7.80%	32.9	12.27%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-4.228e-03	1.0000	44.0	12.26%	46.2	17.23%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-3.120e-03	1.0000	120.0	33.43%	108.2	40.39%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-2.908e-03	1.0000	67.0	18.66%	66.1	24.66%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.863e-03	1.0000	42.0	11.70%	45.5	16.99%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.835e-03	1.0000	88.0	24.51%	84.2	31.41%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-6.080e-04	1.0000	28.0	7.80%	35.5	13.24%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	1.2	0.46%