Information for motif1


Reverse Opposite:

p-value:1e-44
log p-value:-1.033e+02
Information Content per bp:1.731
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets153.3 +/- 86.9bp
Average Position of motif in Background111.0 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0153.1_HNF1B/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAAACAGTGA
GTTAAATATTAA

POL002.1_INR/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TAAACAGTGA
--NNNANTGA

MA0040.1_Foxq1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAAACAGTGA
AATAAACAATN-

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAAACAGTGA
GTAAACAG---

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAAACAGTGA
AAATAAACA----

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAACAGTGA----
AATGAACAATGGAATT

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAAACAGTGA
GGTTAAACATTAA

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAACAGTGA
GTAAACAT---

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAAACAGTGA
NDGTAAACARRN-

PH0039.1_Mnx1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAAACAGTGA--
GTACTAATTAGTGGCG