Information for motif10


Reverse Opposite:

p-value:1e-23
log p-value:-5.327e+01
Information Content per bp:1.799
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets151.0 +/- 79.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.69
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCK-
ANTNTTACATGTATNTA

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATGTATCK
GGTAAGTA---

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ATGTATCK----
NTTNTATGAATGTGNNC

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ATGTATCK
NNTNTCATGAATGT

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCK-
NNTATTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCK-
ANTATTACATGTANNNN

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCK-
ANTNNTACATGTANNTN

MA0124.1_NKX3-1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATGTATCK
TAAGTAT--

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCK-
ANTTNTACATGTANTTN

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATGTATCK---
ANNNGGATATATCCNNN