Information for motif12


Reverse Opposite:

p-value:1e-21
log p-value:-4.940e+01
Information Content per bp:1.723
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets141.7 +/- 84.7bp
Average Position of motif in Background103.7 +/- 88.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGAATCTA
NNTNTCATGAATGT-

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGTGAATCTA---
NTTNTATGAATGTGNNC

MA0477.1_FOSL1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTGAATCTA-
GGTGACTCATG

MA0490.1_JUNB/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTGAATCTA
GGATGACTCAT

MA0478.1_FOSL2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTGAATCTA
GGATGACTCAT

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTGAATCTA--
NATGACTCATNN

MA0099.2_JUN::FOS/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTGAATCTA
--TGACTCA-

MA0491.1_JUND/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTGAATCTA-
GGTGACTCATC

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTGAATCTA----
NNGGTGACTCATCANN

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGTGAATCTA
AGGAGATGACTCAT