Information for motif13


Reverse Opposite:

p-value:1e-21
log p-value:-4.940e+01
Information Content per bp:1.597
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets141.8 +/- 79.8bp
Average Position of motif in Background203.5 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AATRTGGAAA-
-ATATGCAAAT

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AATRTGGAAA-
----TGGAAAA

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATRTGGAAA---
AAATAAGAAAAAAC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AATRTGGAAA--
--AATGGAAAAT

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AATRTGGAAA
NNTNNACAATGGGANNN

MA0507.1_POU2F2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATRTGGAAA----
-ATATGCAAATNNN

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATRTGGAAA-
-TTATGCAAAT

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATRTGGAAA--
CTAATATTGCTAAA

Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATRTGGAAA--------
NTAATTDGCYAATTANNWWD

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATRTGGAAA---
AACAAGGAAGTAA