Information for motif15


Reverse Opposite:

p-value:1e-20
log p-value:-4.725e+01
Information Content per bp:1.671
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif9.20%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets145.8 +/- 90.1bp
Average Position of motif in Background163.2 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GACAGGGAAA--
GAAAGTGAAAGT

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GACAGGGAAA----
AGAAAGTGAAAGTGA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GACAGGGAAA--
GAAAGTGAAAGT

MA0051.1_IRF2/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GACAGGGAAA-------
GGAAAGCGAAACCAAAAC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GACAGGGAAA--
GAAACTGAAACT

MA0050.2_IRF1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGGAAA------
AAANNGAAAGTGAAAGTAAAN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACAGGGAAA--
GAAASYGAAASY

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GACAGGGAAA----
GGAAANTGAAACTNA

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GACAGGGAAA-
----TGGAAAA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GACAGGGAAA--
--AATGGAAAAT