Information for motif18


Reverse Opposite:

p-value:1e-19
log p-value:-4.431e+01
Information Content per bp:1.723
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif8.80%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets119.4 +/- 65.3bp
Average Position of motif in Background106.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCCTGAAA---
WNAGTCADAVTGAAACTN

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCTGAAA
GAGCACAGCAGGACA

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCTGAAA
CCACACAGCAGGAGA

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCTGAAA
CCACACAGCAGGAGA

MA0117.1_Mafb/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGCCTGAAA
NCGTCAGC------

POL002.1_INR/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCAGCCTGAAA
-TCAGTCTT---

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCTGAAA
HWWGTCAGCAWWTTT

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCAGCCTGAAA
--CAGCC-----

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCCTGAAA
TGAGTCAGCA-----

MA0496.1_MAFK/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCAGCCTGAAA
CTGAGTCAGCAATTT-