Information for motif2


Reverse Opposite:

p-value:1e-38
log p-value:-8.922e+01
Information Content per bp:1.457
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif14.40%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets156.6 +/- 98.1bp
Average Position of motif in Background156.4 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-BYTCTCAGAA-
NTTTCTNAGAAA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-BYTCTCAGAA
ATTTCCAAGAA

MA0520.1_Stat6/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-BYTCTCAGAA----
ANTTCTCAGGAANNN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--BYTCTCAGAA
AGCCACTCAAG-

MA0144.2_STAT3/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:BYTCTCAGAA-
TTTCCCAGAAN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-BYTCTCAGAA
HTTTCCCASG-

MA0518.1_Stat4/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---BYTCTCAGAA-
NNNTTTCCTGGAAA

MA0137.3_STAT1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:BYTCTCAGAA-
TTTCCTGGAAA

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:BYTCTCAGAA
TTCCKNAGAA

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---BYTCTCAGAA--
AGTATTCTCGGTTGC