Information for motif20


Reverse Opposite:

p-value:1e-18
log p-value:-4.190e+01
Information Content per bp:1.741
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif10.80%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets169.7 +/- 75.4bp
Average Position of motif in Background201.6 +/- 79.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGAGT
CCCCCTGCTGTG-

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGAGT--
TNTCCTGCTGTGNNG

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTTCTGAGT------
-NTGCTGAGTCATCCN

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTTCTGAGT--
--TGCTGAGTCA

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTTCTGAGT---
-HTGCTGAGTCAT

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGAGT--
TCNCCTGCTGNGNNN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTTCTGAGT--
--TGCTGACTCA

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTTCTGAGT----
--TGCTGAGTCATC

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTTCTGAGT----
--TGCTGASTCAGC

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTGAGT--
NNTCCTGCTGTGNNN