Information for motif23


Reverse Opposite:

p-value:1e-17
log p-value:-4.062e+01
Information Content per bp:1.648
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif14.00%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets151.9 +/- 78.4bp
Average Position of motif in Background148.6 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGAGAGATTTT
--CNGTGATTTN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGAGATTTT
GAAAGTGAAAGT--

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGATTTT
-GCAGTGATTT-

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGAGATTTT
NNNACCGAGAGTNNN---

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGATTTT
TGCTGTGATTT-

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGAGAGATTTT-
TTGACCGAGAATTCC

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGAGATTTT------
NTGACTCANTTTTTCCANTN

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGAGAGATTTT-----
GACAGAGATATCAGTGT

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GAGAGAGATTTT
AGAAAGTGAAAGTGA

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGAGAGATTTT------
-GGAAAAATTGTTAGGAA