Information for motif25


Reverse Opposite:

p-value:1e-16
log p-value:-3.710e+01
Information Content per bp:1.850
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets129.7 +/- 82.4bp
Average Position of motif in Background256.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0497.1_MEF2C/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGATATTTTG-----
TTCTATTTTTAGNNN

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGATATTTTG----
NNTTTTGTTTTGATNT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGATATTTTG---
-KCTATTTTTRGH

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGATATTTTG---
NNNCTGATATCTCNNNN

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGATATTTTG-----
NNCTTTGTTTTGNTNNN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGATATTTTG-
NNGTANTGTTTTNC

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATTTTG
NCNTTTGTTATTTNN

MA0052.2_MEF2A/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATATTTTG----
NNGCTATTTTTAGCN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGATATTTTG--
--CTATTTTTGG

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGATATTTTG---
CTAATATTGCTAAA