Information for motif26


Reverse Opposite:

p-value:1e-16
log p-value:-3.710e+01
Information Content per bp:1.726
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets124.2 +/- 76.5bp
Average Position of motif in Background121.7 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTGTWMCA
-TTTTCCA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGTWMCA--
ATTTTCCATT

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGTWMCA-
CCAGGAACAG

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGTWMCA--
TTGCAACATN

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGTWMCA-------
TCNNTTTACAGCGNNNT

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGTWMCA-------
TCNCTTTACAGCGNNNT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTWMCA---
-KTTCACACCT

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGTWMCA---
TTATTAGTACATAN

MA0111.1_Spz1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGTWMCA--
GCTGTTACCCT

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGTWMCA----
ANATTTTTGCAANTN