Information for motif30


Reverse Opposite:

p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.540
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets142.6 +/- 79.0bp
Average Position of motif in Background82.9 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AATCCACCTG--
--NNCACCTGNN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AATCCACCTG-----
NNTNCGCACCTGTNGAN

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATCCACCTG
-CCTCACCTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AATCCACCTG-
-NNACAGCTGC

MA0499.1_Myod1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AATCCACCTG-----
--TGCAGCTGTCCCT

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AATCCACCTG
--GCCATCTG

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATCCACCTG
SSAATCCACANN

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AATCCACCTG---
---ACAGCTGTTN

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATCCACCTG
-ATCCAC---

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AATCCACCTG--
--GCCATCTGTT