Information for motif31


Reverse Opposite:

p-value:1e-13
log p-value:-3.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif8.80%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets153.7 +/- 87.8bp
Average Position of motif in Background223.1 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TGAGACTTTCTC----
----ACTTTCACTTTC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGAGACTTTCTC-
---CACTTCCTCT

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGACTTTCTC-----
--TCACTTTCACTTTCN

MA0598.1_EHF/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGAGACTTTCTC
----CCTTCCTG

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGAGACTTTCTC--
----ACTTCCTBGT

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAGACTTTCTC-
NNGCACCTTTCTCC

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGAGACTTTCTC
-GGGAATTTCCC

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGAGACTTTCTC-
NNATTGGACTTTNGNN

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGAGACTTTCTC-----
--NCACTTCCTCTTTTN

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGAGACTTTCTC
-GGGAATTTCC-