Information for motif37


Reverse Opposite:

p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.530
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif9.60%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets143.3 +/- 77.1bp
Average Position of motif in Background246.6 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGAAGAAAGAG---
AGAAGAACAAAGGACTA

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGAAGAAAGAG---
ATAAGAACAAAGGACTA

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGAAGAAAGAG-
AAATAAGAAAAAAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAGAAGAAAGAG
TACTGGAAAAAAAA-

MA0514.1_Sox3/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGAAGAAAGAG
-AAAACAAAGG-

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAGAAGAAAGAG---
NANAGATCAAAGGGNNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAGAAGAAAGAG---
NNNAGATCAAAGGANNN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAGAAGAAAGAG-
-ACATCAAAGGNA

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGAAGAAAGAG---
TATAGATCAAAGGAAAA

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAGAAGAAAGAG
-NGAAGC-----