Information for motif38


Reverse Opposite:

p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif6.40%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets145.3 +/- 80.8bp
Average Position of motif in Background103.7 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCAGTCCT-
GGGGCCGAGGCCTG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGCCCAGTCCT
----CNAGGCCT

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGCCCAGTCCT
ACATGCCCGGGCAT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAGCCCAGTCCT
GGCAAAAGTCCAATAA-

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGCCCAGTCCT
----CTAGGCCT

MA0525.1_TP63/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAGCCCAGTCCT----
AGACATGCCCAGACATGCCC

MA0106.2_TP53/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGCCCAGTCCT-
ACATGCCCAGACATG

MA0090.1_TEAD1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAGCCCAGTCCT---
---CACATTCCTCCG

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCAGTCCT---
GAGCCCTTGTCCCTAA

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AAGCCCAGTCCT--
NNAGTCCCACTCNNNN